Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Gm11543-201ENSMUST00000120758 370 ntBASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Gm11424-201ENSMUST00000121929 829 ntBASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.55■□□□□ 0.4
Ddx55Q6ZPL9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Mir8102-201ENSMUST00000184148 139 ntBASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Gm27989-201ENSMUST00000184721 107 ntBASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Gm17837-201ENSMUST00000186435 985 ntBASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx55Q6ZPL9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Gm13453-201ENSMUST00000118708 357 ntBASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Gm38225-201ENSMUST00000194001 393 ntBASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Gm2423-201ENSMUST00000074863 733 ntBASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.53■□□□□ 0.4
Ddx55Q6ZPL9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Gm29541-201ENSMUST00000191351 678 ntBASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx55Q6ZPL9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx55Q6ZPL9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms