Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gm18056-201ENSMUST00000207670 568 ntBASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gm18061-201ENSMUST00000208350 562 ntBASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gm18063-201ENSMUST00000208529 568 ntBASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gm18052-201ENSMUST00000208750 559 ntBASIC13.02□□□□□ -0.32
Rif1Q6PR54 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rif1Q6PR54 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Gm4984-201ENSMUST00000115987 360 ntBASIC13.01□□□□□ -0.33
Rif1Q6PR54 Snora78-201ENSMUST00000158630 128 ntBASIC13.01□□□□□ -0.33
Rif1Q6PR54 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.01□□□□□ -0.33
Rif1Q6PR54 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Gm44344-201ENSMUST00000200287 129 ntBASIC13.01□□□□□ -0.33
Rif1Q6PR54 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rif1Q6PR54 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 Gm5953-201ENSMUST00000220644 2616 ntBASIC13□□□□□ -0.33
Rif1Q6PR54 Gm29361-201ENSMUST00000183323 2000 ntBASIC13□□□□□ -0.33
Rif1Q6PR54 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Gm13350-201ENSMUST00000120519 479 ntBASIC13□□□□□ -0.33
Rif1Q6PR54 Gm13461-201ENSMUST00000120980 662 ntBASIC13□□□□□ -0.33
Rif1Q6PR54 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Gm20445-201ENSMUST00000061905 565 ntBASIC13□□□□□ -0.33
Rif1Q6PR54 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rif1Q6PR54 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rif1Q6PR54 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rif1Q6PR54 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms