Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ShbQ6PD21 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
ShbQ6PD21 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.59■□□□□ 0.25
ShbQ6PD21 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ShbQ6PD21 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ShbQ6PD21 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.59■□□□□ 0.25
ShbQ6PD21 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ShbQ6PD21 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ShbQ6PD21 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.59■□□□□ 0.25
ShbQ6PD21 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShbQ6PD21 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ShbQ6PD21 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ShbQ6PD21 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.58■□□□□ 0.24
ShbQ6PD21 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.58■□□□□ 0.24
ShbQ6PD21 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.58■□□□□ 0.24
ShbQ6PD21 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Gm17150-201ENSMUST00000165577 381 ntBASIC16.58■□□□□ 0.24
ShbQ6PD21 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
ShbQ6PD21 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.58■□□□□ 0.24
ShbQ6PD21 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.58■□□□□ 0.24
ShbQ6PD21 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShbQ6PD21 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ShbQ6PD21 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ShbQ6PD21 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.57■□□□□ 0.24
ShbQ6PD21 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Mir1897-201ENSMUST00000122581 272 ntBASIC16.57■□□□□ 0.24
ShbQ6PD21 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShbQ6PD21 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ShbQ6PD21 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ShbQ6PD21 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.56■□□□□ 0.24
ShbQ6PD21 Gm15824-201ENSMUST00000119516 955 ntBASIC16.56■□□□□ 0.24
ShbQ6PD21 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.56■□□□□ 0.24
ShbQ6PD21 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.56■□□□□ 0.24
ShbQ6PD21 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ShbQ6PD21 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ShbQ6PD21 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShbQ6PD21 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShbQ6PD21 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms