Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clcn1Q64347 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.55■□□□□ 0.72
Clcn1Q64347 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.55■□□□□ 0.72
Clcn1Q64347 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.55■□□□□ 0.72
Clcn1Q64347 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.55■□□□□ 0.72
Clcn1Q64347 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.55■□□□□ 0.72
Clcn1Q64347 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.54■□□□□ 0.72
Clcn1Q64347 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm43474-201ENSMUST00000196415 774 ntBASIC19.54■□□□□ 0.72
Clcn1Q64347 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.54■□□□□ 0.72
Clcn1Q64347 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.54■□□□□ 0.72
Clcn1Q64347 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn1Q64347 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Clcn1Q64347 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Gm25948-201ENSMUST00000175334 112 ntBASIC19.53■□□□□ 0.72
Clcn1Q64347 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Thap2-203ENSMUST00000218989 527 ntBASIC19.53■□□□□ 0.72
Clcn1Q64347 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Clcn1Q64347 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn1Q64347 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clcn1Q64347 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.52■□□□□ 0.72
Clcn1Q64347 Mir6990-201ENSMUST00000183724 91 ntBASIC19.52■□□□□ 0.72
Clcn1Q64347 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Clcn1Q64347 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.52■□□□□ 0.72
Clcn1Q64347 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Clcn1Q64347 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn1Q64347 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Clcn1Q64347 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms