Protein–RNA interactions for Protein: Q64249

Nr6a1, Nuclear receptor subfamily 6 group A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr6a1Q64249 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr6a1Q64249 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.28■□□□□ 0.04
Nr6a1Q64249 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Gm28659-201ENSMUST00000188013 759 ntBASIC15.28■□□□□ 0.04
Nr6a1Q64249 Gm6443-201ENSMUST00000203599 874 ntBASIC15.28■□□□□ 0.04
Nr6a1Q64249 Gm45328-201ENSMUST00000210942 917 ntBASIC15.28■□□□□ 0.04
Nr6a1Q64249 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr6a1Q64249 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr6a1Q64249 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.27■□□□□ 0.03
Nr6a1Q64249 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nr6a1Q64249 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.26■□□□□ 0.03
Nr6a1Q64249 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.26■□□□□ 0.03
Nr6a1Q64249 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr6a1Q64249 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.25■□□□□ 0.03
Nr6a1Q64249 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Gm34391-201ENSMUST00000203706 907 ntBASIC15.25■□□□□ 0.03
Nr6a1Q64249 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Nr6a1Q64249 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.25■□□□□ 0.03
Nr6a1Q64249 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr6a1Q64249 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms