Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.07■□□□□ 0.32
Ecm1Q61508 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.07■□□□□ 0.32
Ecm1Q61508 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Gm2810-201ENSMUST00000118681 990 ntBASIC17.07■□□□□ 0.32
Ecm1Q61508 Gm15693-201ENSMUST00000120470 637 ntBASIC17.07■□□□□ 0.32
Ecm1Q61508 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.07■□□□□ 0.32
Ecm1Q61508 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Gm16026-204ENSMUST00000162652 683 ntBASIC17.07■□□□□ 0.32
Ecm1Q61508 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ecm1Q61508 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.07■□□□□ 0.32
Ecm1Q61508 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ecm1Q61508 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.06■□□□□ 0.32
Ecm1Q61508 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Gm18737-201ENSMUST00000173594 937 ntBASIC17.06■□□□□ 0.32
Ecm1Q61508 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Gm5186-201ENSMUST00000218781 920 ntBASIC17.06■□□□□ 0.32
Ecm1Q61508 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.06■□□□□ 0.32
Ecm1Q61508 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ecm1Q61508 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.06■□□□□ 0.32
Ecm1Q61508 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.05■□□□□ 0.32
Ecm1Q61508 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.05■□□□□ 0.32
Ecm1Q61508 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.05■□□□□ 0.32
Ecm1Q61508 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.05■□□□□ 0.32
Ecm1Q61508 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ecm1Q61508 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ecm1Q61508 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms