Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.56□□□□□ -0.4
Zic4Q61467 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Zic4Q61467 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.56□□□□□ -0.4
Zic4Q61467 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.56□□□□□ -0.4
Zic4Q61467 Gm26039-201ENSMUST00000158152 144 ntBASIC12.56□□□□□ -0.4
Zic4Q61467 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.56□□□□□ -0.4
Zic4Q61467 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Zic4Q61467 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.56□□□□□ -0.4
Zic4Q61467 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Zic4Q61467 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Zic4Q61467 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.56□□□□□ -0.4
Zic4Q61467 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zic4Q61467 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.55□□□□□ -0.4
Zic4Q61467 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.55□□□□□ -0.4
Zic4Q61467 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.55□□□□□ -0.4
Zic4Q61467 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.55□□□□□ -0.4
Zic4Q61467 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Zic4Q61467 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zic4Q61467 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.54□□□□□ -0.4
Zic4Q61467 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Gm23547-201ENSMUST00000158210 271 ntBASIC12.54□□□□□ -0.4
Zic4Q61467 Gm10052-201ENSMUST00000168019 960 ntBASIC12.54□□□□□ -0.4
Zic4Q61467 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.54□□□□□ -0.4
Zic4Q61467 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Zic4Q61467 Gm7729-201ENSMUST00000050143 801 ntBASIC12.54□□□□□ -0.4
Zic4Q61467 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Zic4Q61467 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zic4Q61467 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Zic4Q61467 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zic4Q61467 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.54□□□□□ -0.4
Zic4Q61467 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.54□□□□□ -0.4
Zic4Q61467 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zic4Q61467 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.53□□□□□ -0.4
Zic4Q61467 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zic4Q61467 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zic4Q61467 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zic4Q61467 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Zic4Q61467 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zic4Q61467 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms