Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.12■□□□□ 0.01
Cacna1eQ61290 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Gm11543-201ENSMUST00000120758 370 ntBASIC15.12■□□□□ 0.01
Cacna1eQ61290 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Gm5779-201ENSMUST00000218467 910 ntBASIC15.12■□□□□ 0.01
Cacna1eQ61290 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Gm27920-201ENSMUST00000183953 96 ntBASIC15.11■□□□□ 0.01
Cacna1eQ61290 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1eQ61290 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.1■□□□□ 0.01
Cacna1eQ61290 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.1■□□□□ 0.01
Cacna1eQ61290 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.1■□□□□ 0.01
Cacna1eQ61290 Mir6977-201ENSMUST00000184960 64 ntBASIC15.1■□□□□ 0.01
Cacna1eQ61290 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.1■□□□□ 0.01
Cacna1eQ61290 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1eQ61290 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Gm18737-201ENSMUST00000173594 937 ntBASIC15.09■□□□□ 0.01
Cacna1eQ61290 Gm27680-201ENSMUST00000184192 160 ntBASIC15.09■□□□□ 0.01
Cacna1eQ61290 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.09■□□□□ 0.01
Cacna1eQ61290 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1eQ61290 Gm27618-201ENSMUST00000183671 60 ntBASIC15.09■□□□□ 0.01
Cacna1eQ61290 Gm17837-201ENSMUST00000186435 985 ntBASIC15.09■□□□□ 0.01
Cacna1eQ61290 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms