Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 AV026068-213ENSMUST00000223675 1171 ntBASIC14.81□□□□□ -0.04
Xrcc1Q60596 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.81□□□□□ -0.04
Xrcc1Q60596 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Xrcc1Q60596 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Gm5682-201ENSMUST00000173402 505 ntBASIC14.8□□□□□ -0.04
Xrcc1Q60596 Mir5126-201ENSMUST00000175513 77 ntBASIC14.8□□□□□ -0.04
Xrcc1Q60596 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.8□□□□□ -0.04
Xrcc1Q60596 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Xrcc1Q60596 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Gm44771-201ENSMUST00000206975 626 ntBASIC14.79□□□□□ -0.04
Xrcc1Q60596 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.79□□□□□ -0.04
Xrcc1Q60596 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.79□□□□□ -0.04
Xrcc1Q60596 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 App-207ENSMUST00000227737 2827 ntBASIC14.79□□□□□ -0.04
Xrcc1Q60596 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Xrcc1Q60596 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.78□□□□□ -0.04
Xrcc1Q60596 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.78□□□□□ -0.04
Xrcc1Q60596 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.78□□□□□ -0.04
Xrcc1Q60596 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.78□□□□□ -0.04
Xrcc1Q60596 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Gm15590-201ENSMUST00000078419 552 ntBASIC14.78□□□□□ -0.04
Xrcc1Q60596 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Xrcc1Q60596 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Xrcc1Q60596 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Xrcc1Q60596 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Xrcc1Q60596 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Xrcc1Q60596 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Xrcc1Q60596 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Xrcc1Q60596 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms