Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Gm12382-201ENSMUST00000122005 922 ntBASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-3Q5R1C3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-3Q5R1C3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Gm37025-201ENSMUST00000195159 829 ntBASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-3Q5R1C3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-3Q5R1C3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-3Q5R1C3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms