Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Gm25144-201ENSMUST00000179561 110 ntBASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Gm25352-201ENSMUST00000179815 110 ntBASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-2Q5R1B6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-2Q5R1B6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Gm16026-204ENSMUST00000162652 683 ntBASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Gm38294-201ENSMUST00000192831 381 ntBASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-2Q5R1B6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Gm7669-201ENSMUST00000210184 1603 ntBASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Gm18049-201ENSMUST00000208909 581 ntBASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Gm7730-201ENSMUST00000212486 454 ntBASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15□□□□□ -0.01
Trav8d-2Q5R1B6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms