Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Gm44344-201ENSMUST00000200287 129 ntBASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Vps13aQ5H8C4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps13aQ5H8C4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Gm15198-201ENSMUST00000117283 177 ntBASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps13aQ5H8C4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Gm43179-201ENSMUST00000198797 275 ntBASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Vps13aQ5H8C4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps13aQ5H8C4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps13aQ5H8C4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps13aQ5H8C4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.16■□□□□ 0.02
Vps13aQ5H8C4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms