Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rnf20Q5DTM8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Gm9103-201ENSMUST00000119371 405 ntBASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
Rnf20Q5DTM8 Sybu-209ENSMUST00000228639 4113 ntBASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf20Q5DTM8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf20Q5DTM8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms