Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srrm1Q52KI8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srrm1Q52KI8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srrm1Q52KI8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srrm1Q52KI8 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.33■□□□□ 0.36
Srrm1Q52KI8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Srrm1Q52KI8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm1Q52KI8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Gm27430-201ENSMUST00000184585 107 ntBASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Gm44333-201ENSMUST00000197168 107 ntBASIC17.31■□□□□ 0.36
Srrm1Q52KI8 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.31■□□□□ 0.36
Srrm1Q52KI8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Gm24158-201ENSMUST00000175263 71 ntBASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Gm27437-201ENSMUST00000183429 107 ntBASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Gm10253-201ENSMUST00000194270 940 ntBASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Gm2423-201ENSMUST00000074863 733 ntBASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm1Q52KI8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm22065-201ENSMUST00000103753 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm22066-201ENSMUST00000103761 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm24932-201ENSMUST00000103763 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm24115-201ENSMUST00000103799 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm22190-201ENSMUST00000103827 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm22191-201ENSMUST00000103831 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm24721-201ENSMUST00000103849 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm28018-201ENSMUST00000103869 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm26399-201ENSMUST00000103937 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm13223-201ENSMUST00000118609 747 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm25349-201ENSMUST00000177728 110 ntBASIC17.29■□□□□ 0.36
Srrm1Q52KI8 Gm23616-201ENSMUST00000177797 110 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms