Protein–RNA interactions for Protein: Q3UQI9

Mindy4, Probable ubiquitin carboxyl-terminal hydrolase MINDY-4, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4Q3UQI9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Gm38027-201ENSMUST00000192315 235 ntBASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Gm7791-201ENSMUST00000219066 539 ntBASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4Q3UQI9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4Q3UQI9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Gm23547-201ENSMUST00000158210 271 ntBASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4Q3UQI9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4Q3UQI9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms