Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Spg7Q3ULF4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.39■□□□□ 0.53
Spg7Q3ULF4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.39■□□□□ 0.53
Spg7Q3ULF4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Spg7Q3ULF4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.39■□□□□ 0.53
Spg7Q3ULF4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Spg7Q3ULF4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Gm15920-201ENSMUST00000118998 402 ntBASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Spg7Q3ULF4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg7Q3ULF4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Spg7Q3ULF4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms