Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Ctdnep1Q3TP92 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ctdnep1Q3TP92 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ctdnep1Q3TP92 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Gm4535-201ENSMUST00000182274 558 ntBASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Gm10355-201ENSMUST00000097146 517 ntBASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctdnep1Q3TP92 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ctdnep1Q3TP92 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Gm24589-201ENSMUST00000116692 94 ntBASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Gm17971-201ENSMUST00000190239 806 ntBASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ctdnep1Q3TP92 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Gm43347-201ENSMUST00000200226 580 ntBASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.86■□□□□ 0.45
Ctdnep1Q3TP92 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ctdnep1Q3TP92 Gm8318-201ENSMUST00000182954 872 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms