Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Colec11Q3SXB8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.69■□□□□ 0.1
Colec11Q3SXB8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Gm27646-201ENSMUST00000183989 110 ntBASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Colec11Q3SXB8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.67■□□□□ 0.1
Colec11Q3SXB8 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Gm15590-201ENSMUST00000078419 552 ntBASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Colec11Q3SXB8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Gm14722-201ENSMUST00000118943 689 ntBASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Gm1401-201ENSMUST00000122048 772 ntBASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 AW822252-206ENSMUST00000208904 237 ntBASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Grk6-207ENSMUST00000225925 2769 ntBASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colec11Q3SXB8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colec11Q3SXB8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms