Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Nhej1Q3KNJ2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.52■□□□□ 0.23
Nhej1Q3KNJ2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nhej1Q3KNJ2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nhej1Q3KNJ2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nhej1Q3KNJ2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nhej1Q3KNJ2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nhej1Q3KNJ2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Nhej1Q3KNJ2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nhej1Q3KNJ2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.49■□□□□ 0.23
Nhej1Q3KNJ2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms