Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.82□□□□□ -0.36
Trim63Q38HM4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.82□□□□□ -0.36
Trim63Q38HM4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.82□□□□□ -0.36
Trim63Q38HM4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim63Q38HM4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Gm9959-201ENSMUST00000068277 390 ntBASIC12.81□□□□□ -0.36
Trim63Q38HM4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.81□□□□□ -0.36
Trim63Q38HM4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim63Q38HM4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim63Q38HM4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms