Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.29□□□□□ -0.12
Col10a1Q05306 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col10a1Q05306 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.28□□□□□ -0.12
Col10a1Q05306 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.28□□□□□ -0.12
Col10a1Q05306 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.28□□□□□ -0.12
Col10a1Q05306 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.28□□□□□ -0.12
Col10a1Q05306 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col10a1Q05306 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col10a1Q05306 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.27□□□□□ -0.12
Col10a1Q05306 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.27□□□□□ -0.12
Col10a1Q05306 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col10a1Q05306 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.27□□□□□ -0.13
Col10a1Q05306 Gm15173-201ENSMUST00000122049 433 ntBASIC14.27□□□□□ -0.13
Col10a1Q05306 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Col10a1Q05306 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.27□□□□□ -0.13
Col10a1Q05306 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.27□□□□□ -0.13
Col10a1Q05306 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.27□□□□□ -0.13
Col10a1Q05306 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col10a1Q05306 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.26□□□□□ -0.13
Col10a1Q05306 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Gm15358-201ENSMUST00000119249 520 ntBASIC14.26□□□□□ -0.13
Col10a1Q05306 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col10a1Q05306 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col10a1Q05306 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms