Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Gm43125-201ENSMUST00000201724 730 ntBASIC19.28■□□□□ 0.68
Col1a2Q01149 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Dancr-204ENSMUST00000132389 2347 ntBASIC19.28■□□□□ 0.68
Col1a2Q01149 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.28■□□□□ 0.68
Col1a2Q01149 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.28■□□□□ 0.68
Col1a2Q01149 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col1a2Q01149 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Col1a2Q01149 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
Col1a2Q01149 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col1a2Q01149 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.27■□□□□ 0.68
Col1a2Q01149 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col1a2Q01149 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col1a2Q01149 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col1a2Q01149 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col1a2Q01149 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.26■□□□□ 0.67
Col1a2Q01149 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col1a2Q01149 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.26■□□□□ 0.67
Col1a2Q01149 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.26■□□□□ 0.67
Col1a2Q01149 Auts2-212ENSMUST00000178555 309 ntBASIC19.26■□□□□ 0.67
Col1a2Q01149 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.26■□□□□ 0.67
Col1a2Q01149 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Col1a2Q01149 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col1a2Q01149 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col1a2Q01149 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col1a2Q01149 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Gm13616-201ENSMUST00000120600 222 ntBASIC19.25■□□□□ 0.67
Col1a2Q01149 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.25■□□□□ 0.67
Col1a2Q01149 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col1a2Q01149 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.25■□□□□ 0.67
Col1a2Q01149 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.24■□□□□ 0.67
Col1a2Q01149 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.24■□□□□ 0.67
Col1a2Q01149 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Gm15920-201ENSMUST00000118998 402 ntBASIC19.24■□□□□ 0.67
Col1a2Q01149 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.24■□□□□ 0.67
Col1a2Q01149 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Col1a2Q01149 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Col1a2Q01149 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col1a2Q01149 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms