Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Gbx1P82976 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.57□□□□□ -0.08
Gbx1P82976 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Gbx1P82976 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.57□□□□□ -0.08
Gbx1P82976 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.57□□□□□ -0.08
Gbx1P82976 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.57□□□□□ -0.08
Gbx1P82976 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gbx1P82976 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.56□□□□□ -0.08
Gbx1P82976 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.56□□□□□ -0.08
Gbx1P82976 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gbx1P82976 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gbx1P82976 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.56□□□□□ -0.08
Gbx1P82976 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Gbx1P82976 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.56□□□□□ -0.08
Gbx1P82976 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.56□□□□□ -0.08
Gbx1P82976 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Gbx1P82976 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Gbx1P82976 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gbx1P82976 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Gbx1P82976 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.55□□□□□ -0.08
Gbx1P82976 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm8825-201ENSMUST00000182565 998 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm4518-201ENSMUST00000182638 718 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Gbx1P82976 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.55□□□□□ -0.08
Gbx1P82976 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.55□□□□□ -0.08
Gbx1P82976 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.55□□□□□ -0.08
Gbx1P82976 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gbx1P82976 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Gbx1P82976 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gbx1P82976 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gbx1P82976 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gbx1P82976 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms