Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Gm9768-201ENSMUST00000206007 2861 ntBASIC13□□□□□ -0.33
SgcaP82350 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13□□□□□ -0.33
SgcaP82350 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13□□□□□ -0.33
SgcaP82350 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13□□□□□ -0.33
SgcaP82350 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcaP82350 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SgcaP82350 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
SgcaP82350 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SgcaP82350 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SgcaP82350 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.99□□□□□ -0.33
SgcaP82350 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.99□□□□□ -0.33
SgcaP82350 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.99□□□□□ -0.33
SgcaP82350 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.99□□□□□ -0.33
SgcaP82350 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcaP82350 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SgcaP82350 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.98□□□□□ -0.33
SgcaP82350 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcaP82350 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcaP82350 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcaP82350 Gm11539-201ENSMUST00000119837 557 ntBASIC12.98□□□□□ -0.33
SgcaP82350 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.98□□□□□ -0.33
SgcaP82350 Gm29257-201ENSMUST00000186115 639 ntBASIC12.98□□□□□ -0.33
SgcaP82350 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.98□□□□□ -0.33
SgcaP82350 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.98□□□□□ -0.33
SgcaP82350 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.98□□□□□ -0.33
SgcaP82350 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.98□□□□□ -0.33
SgcaP82350 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcaP82350 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcaP82350 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcaP82350 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcaP82350 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms