Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.84■□□□□ 0.13
Ybx1P62960 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ybx1P62960 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.84■□□□□ 0.13
Ybx1P62960 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.84■□□□□ 0.13
Ybx1P62960 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ybx1P62960 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ybx1P62960 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Ybx1P62960 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ybx1P62960 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ybx1P62960 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.83■□□□□ 0.12
Ybx1P62960 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.83■□□□□ 0.12
Ybx1P62960 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ybx1P62960 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.83■□□□□ 0.12
Ybx1P62960 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.83■□□□□ 0.12
Ybx1P62960 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Thap2-203ENSMUST00000218989 527 ntBASIC15.83■□□□□ 0.12
Ybx1P62960 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.83■□□□□ 0.12
Ybx1P62960 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ybx1P62960 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Ybx1P62960 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.82■□□□□ 0.12
Ybx1P62960 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ybx1P62960 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.82■□□□□ 0.12
Ybx1P62960 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ybx1P62960 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Ybx1P62960 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ybx1P62960 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.82■□□□□ 0.12
Ybx1P62960 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ybx1P62960 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ybx1P62960 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ybx1P62960 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ybx1P62960 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ybx1P62960 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Gm9385-201ENSMUST00000117563 472 ntBASIC15.81■□□□□ 0.12
Ybx1P62960 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 AA543401-201ENSMUST00000164248 1269 ntBASIC15.81■□□□□ 0.12
Ybx1P62960 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Ybx1P62960 Gm5312-201ENSMUST00000203728 547 ntBASIC15.81■□□□□ 0.12
Ybx1P62960 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.81■□□□□ 0.12
Ybx1P62960 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.81■□□□□ 0.12
Ybx1P62960 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ybx1P62960 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms