Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CckbrP56481 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.36□□□□□ -0.11
CckbrP56481 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.36□□□□□ -0.11
CckbrP56481 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.36□□□□□ -0.11
CckbrP56481 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CckbrP56481 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.36□□□□□ -0.11
CckbrP56481 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.36□□□□□ -0.11
CckbrP56481 Gm27741-201ENSMUST00000185060 237 ntBASIC14.36□□□□□ -0.11
CckbrP56481 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.36□□□□□ -0.11
CckbrP56481 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.36□□□□□ -0.11
CckbrP56481 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.36□□□□□ -0.11
CckbrP56481 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CckbrP56481 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.35□□□□□ -0.11
CckbrP56481 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Gm25990-201ENSMUST00000102440 86 ntBASIC14.35□□□□□ -0.11
CckbrP56481 Gm13418-201ENSMUST00000119097 944 ntBASIC14.35□□□□□ -0.11
CckbrP56481 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CckbrP56481 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Gm11780-201ENSMUST00000136880 516 ntBASIC14.35□□□□□ -0.11
CckbrP56481 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CckbrP56481 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Gm6296-201ENSMUST00000222599 943 ntBASIC14.35□□□□□ -0.11
CckbrP56481 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CckbrP56481 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CckbrP56481 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CckbrP56481 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.34□□□□□ -0.11
CckbrP56481 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CckbrP56481 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms