Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Sox3P53784 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox3P53784 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox3P53784 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sox3P53784 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Sox3P53784 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.84□□□□□ -0.03
Sox3P53784 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sox3P53784 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.84□□□□□ -0.03
Sox3P53784 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox3P53784 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.84□□□□□ -0.03
Sox3P53784 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.84□□□□□ -0.03
Sox3P53784 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.84□□□□□ -0.03
Sox3P53784 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.84□□□□□ -0.03
Sox3P53784 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sox3P53784 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.84□□□□□ -0.03
Sox3P53784 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox3P53784 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.83□□□□□ -0.03
Sox3P53784 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.83□□□□□ -0.03
Sox3P53784 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.83□□□□□ -0.03
Sox3P53784 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sox3P53784 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.83□□□□□ -0.04
Sox3P53784 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox3P53784 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Sox3P53784 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.83□□□□□ -0.04
Sox3P53784 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.83□□□□□ -0.04
Sox3P53784 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.83□□□□□ -0.04
Sox3P53784 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox3P53784 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox3P53784 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Gm11780-201ENSMUST00000136880 516 ntBASIC14.82□□□□□ -0.04
Sox3P53784 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox3P53784 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox3P53784 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox3P53784 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox3P53784 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox3P53784 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox3P53784 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox3P53784 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox3P53784 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox3P53784 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox3P53784 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms