Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccr4P51680 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccr4P51680 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr4P51680 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccr4P51680 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.36□□□□□ -0.11
Ccr4P51680 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccr4P51680 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Gm15165-201ENSMUST00000118140 502 ntBASIC14.36□□□□□ -0.11
Ccr4P51680 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ccr4P51680 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccr4P51680 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.36□□□□□ -0.11
Ccr4P51680 Gm27867-201ENSMUST00000184778 125 ntBASIC14.36□□□□□ -0.11
Ccr4P51680 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccr4P51680 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ccr4P51680 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccr4P51680 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Ccr4P51680 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccr4P51680 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ccr4P51680 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr4P51680 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccr4P51680 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccr4P51680 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccr4P51680 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccr4P51680 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccr4P51680 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccr4P51680 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.35□□□□□ -0.11
Ccr4P51680 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.35□□□□□ -0.11
Ccr4P51680 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccr4P51680 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr4P51680 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccr4P51680 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccr4P51680 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccr4P51680 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccr4P51680 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccr4P51680 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccr4P51680 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccr4P51680 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Gm25745-201ENSMUST00000174945 133 ntBASIC14.34□□□□□ -0.11
Ccr4P51680 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ccr4P51680 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ccr4P51680 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ccr4P51680 Gm7977-201ENSMUST00000193787 748 ntBASIC14.34□□□□□ -0.11
Ccr4P51680 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.34□□□□□ -0.11
Ccr4P51680 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr4P51680 Gm7367-201ENSMUST00000057611 492 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms