Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdh4P39038 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdh4P39038 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdh4P39038 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdh4P39038 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdh4P39038 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Gm7222-201ENSMUST00000117512 906 ntBASIC14.82□□□□□ -0.04
Cdh4P39038 Gm15358-201ENSMUST00000119249 520 ntBASIC14.82□□□□□ -0.04
Cdh4P39038 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.82□□□□□ -0.04
Cdh4P39038 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cdh4P39038 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdh4P39038 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh4P39038 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.81□□□□□ -0.04
Cdh4P39038 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Cdh4P39038 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdh4P39038 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.81□□□□□ -0.04
Cdh4P39038 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh4P39038 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh4P39038 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdh4P39038 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cdh4P39038 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdh4P39038 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.8□□□□□ -0.04
Cdh4P39038 Gm18733-201ENSMUST00000173950 856 ntBASIC14.8□□□□□ -0.04
Cdh4P39038 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdh4P39038 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh4P39038 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cdh4P39038 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh4P39038 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms