Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm10175-202ENSMUST00000208752 441 ntBASIC16.93■□□□□ 0.3
Sox5P35710 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Sox5P35710 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Sox5P35710 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sox5P35710 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sox5P35710 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.92■□□□□ 0.3
Sox5P35710 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Sox5P35710 Gm17808-201ENSMUST00000200859 894 ntBASIC16.92■□□□□ 0.3
Sox5P35710 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
Sox5P35710 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox5P35710 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sox5P35710 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox5P35710 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox5P35710 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Sox5P35710 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.91■□□□□ 0.3
Sox5P35710 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm8825-201ENSMUST00000182565 998 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm4518-201ENSMUST00000182638 718 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm29518-201ENSMUST00000190858 372 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.91■□□□□ 0.3
Sox5P35710 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sox5P35710 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox5P35710 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sox5P35710 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.9■□□□□ 0.3
Sox5P35710 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox5P35710 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms