Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.28□□□□□ -0.44
Rom1P32958 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rom1P32958 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.27□□□□□ -0.44
Rom1P32958 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Rom1P32958 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rom1P32958 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rom1P32958 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.27□□□□□ -0.45
Rom1P32958 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.27□□□□□ -0.45
Rom1P32958 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.27□□□□□ -0.45
Rom1P32958 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.27□□□□□ -0.45
Rom1P32958 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.27□□□□□ -0.45
Rom1P32958 Gm7370-201ENSMUST00000219471 767 ntBASIC12.27□□□□□ -0.45
Rom1P32958 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rom1P32958 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.27□□□□□ -0.45
Rom1P32958 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rom1P32958 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.27□□□□□ -0.45
Rom1P32958 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rom1P32958 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rom1P32958 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rom1P32958 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rom1P32958 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.26□□□□□ -0.45
Rom1P32958 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rom1P32958 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.26□□□□□ -0.45
Rom1P32958 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Gm10052-201ENSMUST00000168019 960 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Gm44430-201ENSMUST00000203376 995 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Gm7729-201ENSMUST00000050143 801 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rom1P32958 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rom1P32958 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rom1P32958 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.26□□□□□ -0.45
Rom1P32958 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rom1P32958 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rom1P32958 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.26□□□□□ -0.45
Rom1P32958 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rom1P32958 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.25□□□□□ -0.45
Rom1P32958 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rom1P32958 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.25□□□□□ -0.45
Rom1P32958 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.25□□□□□ -0.45
Rom1P32958 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms