Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Gm29257-201ENSMUST00000186115 639 ntBASIC14.18□□□□□ -0.14
Hmgn1P18608 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.18□□□□□ -0.14
Hmgn1P18608 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hmgn1P18608 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn1P18608 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.17□□□□□ -0.14
Hmgn1P18608 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn1P18608 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.17□□□□□ -0.14
Hmgn1P18608 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn1P18608 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.17□□□□□ -0.14
Hmgn1P18608 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.17□□□□□ -0.14
Hmgn1P18608 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn1P18608 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn1P18608 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmgn1P18608 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmgn1P18608 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmgn1P18608 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.16□□□□□ -0.14
Hmgn1P18608 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmgn1P18608 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.16□□□□□ -0.14
Hmgn1P18608 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn1P18608 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hmgn1P18608 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms