Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd44P15379 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cd44P15379 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.27■□□□□ 0.2
Cd44P15379 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.27■□□□□ 0.2
Cd44P15379 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.27■□□□□ 0.2
Cd44P15379 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.27■□□□□ 0.2
Cd44P15379 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cd44P15379 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.27■□□□□ 0.2
Cd44P15379 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.27■□□□□ 0.2
Cd44P15379 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Cd44P15379 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.27■□□□□ 0.2
Cd44P15379 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cd44P15379 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd44P15379 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd44P15379 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd44P15379 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd44P15379 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd44P15379 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd44P15379 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cd44P15379 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd44P15379 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cd44P15379 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.26■□□□□ 0.19
Cd44P15379 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Cd44P15379 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cd44P15379 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.26■□□□□ 0.19
Cd44P15379 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.26■□□□□ 0.19
Cd44P15379 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Cd44P15379 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd44P15379 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cd44P15379 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Cd44P15379 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cd44P15379 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.25■□□□□ 0.19
Cd44P15379 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.25■□□□□ 0.19
Cd44P15379 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cd44P15379 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cd44P15379 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.25■□□□□ 0.19
Cd44P15379 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cd44P15379 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.25■□□□□ 0.19
Cd44P15379 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cd44P15379 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cd44P15379 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.25■□□□□ 0.19
Cd44P15379 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cd44P15379 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd44P15379 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.25■□□□□ 0.19
Cd44P15379 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Cd44P15379 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd44P15379 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cd44P15379 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms