Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.68□□□□□ -0.06
Msx1P13297 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Msx1P13297 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Msx1P13297 Gm15920-201ENSMUST00000118998 402 ntBASIC14.68□□□□□ -0.06
Msx1P13297 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.68□□□□□ -0.06
Msx1P13297 Mir3113-201ENSMUST00000175478 76 ntBASIC14.68□□□□□ -0.06
Msx1P13297 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.68□□□□□ -0.06
Msx1P13297 Gm42660-201ENSMUST00000197733 947 ntBASIC14.68□□□□□ -0.06
Msx1P13297 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.68□□□□□ -0.06
Msx1P13297 Gm9172-201ENSMUST00000212092 954 ntBASIC14.68□□□□□ -0.06
Msx1P13297 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.68□□□□□ -0.06
Msx1P13297 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Msx1P13297 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.68□□□□□ -0.06
Msx1P13297 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msx1P13297 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.67□□□□□ -0.06
Msx1P13297 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.67□□□□□ -0.06
Msx1P13297 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.67□□□□□ -0.06
Msx1P13297 Mir8117-201ENSMUST00000184773 107 ntBASIC14.67□□□□□ -0.06
Msx1P13297 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Msx1P13297 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.67□□□□□ -0.06
Msx1P13297 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msx1P13297 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msx1P13297 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.66□□□□□ -0.06
Msx1P13297 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Msx1P13297 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.66□□□□□ -0.06
Msx1P13297 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Msx1P13297 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msx1P13297 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Msx1P13297 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.65□□□□□ -0.06
Msx1P13297 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Msx1P13297 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msx1P13297 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms