Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.85□□□□□ -0.03
Cntn1P12960 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cntn1P12960 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cntn1P12960 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cntn1P12960 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.85□□□□□ -0.03
Cntn1P12960 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Prob1-201ENSMUST00000097619 3021 ntBASIC14.84□□□□□ -0.03
Cntn1P12960 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Cntn1P12960 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.84□□□□□ -0.03
Cntn1P12960 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.84□□□□□ -0.03
Cntn1P12960 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.84□□□□□ -0.03
Cntn1P12960 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.84□□□□□ -0.03
Cntn1P12960 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.84□□□□□ -0.03
Cntn1P12960 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.84□□□□□ -0.03
Cntn1P12960 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cntn1P12960 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cntn1P12960 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cntn1P12960 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cntn1P12960 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.83□□□□□ -0.03
Cntn1P12960 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cntn1P12960 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Gm11594-201ENSMUST00000122313 162 ntBASIC14.83□□□□□ -0.04
Cntn1P12960 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cntn1P12960 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.83□□□□□ -0.04
Cntn1P12960 Gm5264-201ENSMUST00000190584 848 ntBASIC14.83□□□□□ -0.04
Cntn1P12960 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cntn1P12960 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.83□□□□□ -0.04
Cntn1P12960 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cntn1P12960 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cntn1P12960 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cntn1P12960 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cntn1P12960 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.82□□□□□ -0.04
Cntn1P12960 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cntn1P12960 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cntn1P12960 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms