Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.46□□□□□ -0.25
PtcraP0C6B2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Gm44487-201ENSMUST00000205145 325 ntBASIC13.46□□□□□ -0.25
PtcraP0C6B2 Gm6376-201ENSMUST00000209407 580 ntBASIC13.46□□□□□ -0.25
PtcraP0C6B2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PtcraP0C6B2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PtcraP0C6B2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PtcraP0C6B2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PtcraP0C6B2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.46□□□□□ -0.26
PtcraP0C6B2 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.45□□□□□ -0.26
PtcraP0C6B2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PtcraP0C6B2 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.45□□□□□ -0.26
PtcraP0C6B2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Gm7222-201ENSMUST00000117512 906 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Gm11764-201ENSMUST00000120221 623 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Gm7230-201ENSMUST00000173026 815 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Mir8098-201ENSMUST00000184011 137 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.44□□□□□ -0.26
PtcraP0C6B2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PtcraP0C6B2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PtcraP0C6B2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PtcraP0C6B2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PtcraP0C6B2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PtcraP0C6B2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PtcraP0C6B2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PtcraP0C6B2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms