Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.01■□□□□ 0.15
PrnpP04925 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PrnpP04925 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PrnpP04925 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PrnpP04925 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.01■□□□□ 0.15
PrnpP04925 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.01■□□□□ 0.15
PrnpP04925 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PrnpP04925 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
PrnpP04925 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PrnpP04925 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PrnpP04925 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Gm25287-201ENSMUST00000103846 110 ntBASIC16■□□□□ 0.15
PrnpP04925 Gm22918-201ENSMUST00000103855 110 ntBASIC16■□□□□ 0.15
PrnpP04925 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16■□□□□ 0.15
PrnpP04925 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16■□□□□ 0.15
PrnpP04925 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16■□□□□ 0.15
PrnpP04925 Gm24158-201ENSMUST00000175263 71 ntBASIC16■□□□□ 0.15
PrnpP04925 Gm27321-201ENSMUST00000185021 205 ntBASIC16■□□□□ 0.15
PrnpP04925 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16■□□□□ 0.15
PrnpP04925 AC131710.1-201ENSMUST00000228336 990 ntBASIC16■□□□□ 0.15
PrnpP04925 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16■□□□□ 0.15
PrnpP04925 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16■□□□□ 0.15
PrnpP04925 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16■□□□□ 0.15
PrnpP04925 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16■□□□□ 0.15
PrnpP04925 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16■□□□□ 0.15
PrnpP04925 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PrnpP04925 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16■□□□□ 0.15
PrnpP04925 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PrnpP04925 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.99■□□□□ 0.15
PrnpP04925 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PrnpP04925 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.99■□□□□ 0.15
PrnpP04925 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.99■□□□□ 0.15
PrnpP04925 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PrnpP04925 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PrnpP04925 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PrnpP04925 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PrnpP04925 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
PrnpP04925 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.98■□□□□ 0.15
PrnpP04925 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.98■□□□□ 0.15
PrnpP04925 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.98■□□□□ 0.15
PrnpP04925 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.98■□□□□ 0.15
PrnpP04925 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms