Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1hO88427 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1hO88427 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.97□□□□□ -0.01
Cacna1hO88427 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.97□□□□□ -0.01
Cacna1hO88427 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Gm9719-201ENSMUST00000162765 543 ntBASIC14.97□□□□□ -0.01
Cacna1hO88427 Gm8318-201ENSMUST00000182954 872 ntBASIC14.97□□□□□ -0.01
Cacna1hO88427 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1hO88427 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.97□□□□□ -0.01
Cacna1hO88427 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1hO88427 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cacna1hO88427 Gm15236-201ENSMUST00000117309 379 ntBASIC14.96□□□□□ -0.01
Cacna1hO88427 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.96□□□□□ -0.01
Cacna1hO88427 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cacna1hO88427 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.96□□□□□ -0.01
Cacna1hO88427 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1hO88427 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1hO88427 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1hO88427 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1hO88427 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.96□□□□□ -0.02
Cacna1hO88427 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.96□□□□□ -0.02
Cacna1hO88427 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.96□□□□□ -0.02
Cacna1hO88427 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Cacna1hO88427 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cacna1hO88427 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm13392-201ENSMUST00000117708 150 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.95□□□□□ -0.02
Cacna1hO88427 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm3436-201ENSMUST00000179930 840 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.95□□□□□ -0.02
Cacna1hO88427 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cacna1hO88427 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.94□□□□□ -0.02
Cacna1hO88427 Gm10499-201ENSMUST00000174094 934 ntBASIC14.94□□□□□ -0.02
Cacna1hO88427 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.94□□□□□ -0.02
Cacna1hO88427 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.94□□□□□ -0.02
Cacna1hO88427 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.94□□□□□ -0.02
Cacna1hO88427 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cacna1hO88427 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms