Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col5a1O88207 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col5a1O88207 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.86□□□□□ -0.19
Col5a1O88207 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.86□□□□□ -0.19
Col5a1O88207 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.86□□□□□ -0.19
Col5a1O88207 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.86□□□□□ -0.19
Col5a1O88207 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.86□□□□□ -0.19
Col5a1O88207 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col5a1O88207 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.86□□□□□ -0.19
Col5a1O88207 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.86□□□□□ -0.19
Col5a1O88207 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col5a1O88207 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.85□□□□□ -0.19
Col5a1O88207 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.85□□□□□ -0.19
Col5a1O88207 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col5a1O88207 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col5a1O88207 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col5a1O88207 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col5a1O88207 Gm6912-201ENSMUST00000117218 544 ntBASIC13.85□□□□□ -0.19
Col5a1O88207 Gm2272-201ENSMUST00000194903 582 ntBASIC13.85□□□□□ -0.19
Col5a1O88207 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.85□□□□□ -0.19
Col5a1O88207 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.85□□□□□ -0.19
Col5a1O88207 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col5a1O88207 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.84□□□□□ -0.19
Col5a1O88207 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col5a1O88207 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.84□□□□□ -0.19
Col5a1O88207 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col5a1O88207 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col5a1O88207 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Col5a1O88207 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.84□□□□□ -0.19
Col5a1O88207 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.84□□□□□ -0.19
Col5a1O88207 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Col5a1O88207 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.84□□□□□ -0.19
Col5a1O88207 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col5a1O88207 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col5a1O88207 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col5a1O88207 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Col5a1O88207 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col5a1O88207 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.83□□□□□ -0.2
Col5a1O88207 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.83□□□□□ -0.2
Col5a1O88207 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col5a1O88207 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Col5a1O88207 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col5a1O88207 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.83□□□□□ -0.2
Col5a1O88207 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col5a1O88207 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms