Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.26□□□□□ -0.45
Pde6dO55057 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.26□□□□□ -0.45
Pde6dO55057 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.26□□□□□ -0.45
Pde6dO55057 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.25□□□□□ -0.45
Pde6dO55057 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pde6dO55057 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pde6dO55057 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Gm27405-201ENSMUST00000184201 112 ntBASIC12.25□□□□□ -0.45
Pde6dO55057 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pde6dO55057 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.25□□□□□ -0.45
Pde6dO55057 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.25□□□□□ -0.45
Pde6dO55057 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pde6dO55057 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.25□□□□□ -0.45
Pde6dO55057 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pde6dO55057 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pde6dO55057 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Gm12085-201ENSMUST00000119263 940 ntBASIC12.24□□□□□ -0.45
Pde6dO55057 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.24□□□□□ -0.45
Pde6dO55057 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Pde6dO55057 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.24□□□□□ -0.45
Pde6dO55057 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.24□□□□□ -0.45
Pde6dO55057 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Pde6dO55057 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pde6dO55057 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pde6dO55057 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pde6dO55057 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pde6dO55057 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pde6dO55057 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Pde6dO55057 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.23□□□□□ -0.45
Pde6dO55057 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms