Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Prom1O54990 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prom1O54990 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Prom1O54990 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prom1O54990 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Prom1O54990 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Prom1O54990 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.03■□□□□ 0.32
Prom1O54990 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Prom1O54990 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Prom1O54990 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prom1O54990 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Prom1O54990 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Prom1O54990 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.02■□□□□ 0.32
Prom1O54990 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.02■□□□□ 0.32
Prom1O54990 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.02■□□□□ 0.32
Prom1O54990 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prom1O54990 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.02■□□□□ 0.32
Prom1O54990 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Prom1O54990 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prom1O54990 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Prom1O54990 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Prom1O54990 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prom1O54990 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.02■□□□□ 0.31
Prom1O54990 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prom1O54990 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Prom1O54990 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prom1O54990 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.01■□□□□ 0.31
Prom1O54990 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.01■□□□□ 0.31
Prom1O54990 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.01■□□□□ 0.31
Prom1O54990 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.01■□□□□ 0.31
Prom1O54990 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.01■□□□□ 0.31
Prom1O54990 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.01■□□□□ 0.31
Prom1O54990 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.01■□□□□ 0.31
Prom1O54990 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prom1O54990 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prom1O54990 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Prom1O54990 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Prom1O54990 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17■□□□□ 0.31
Prom1O54990 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17■□□□□ 0.31
Prom1O54990 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17■□□□□ 0.31
Prom1O54990 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17■□□□□ 0.31
Prom1O54990 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17■□□□□ 0.31
Prom1O54990 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17■□□□□ 0.31
Prom1O54990 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Gm20628-201ENSMUST00000177363 3215 ntBASIC17■□□□□ 0.31
Prom1O54990 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prom1O54990 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms