Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.12□□□□□ -0.15
Matn3O35701 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Matn3O35701 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Matn3O35701 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Matn3O35701 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Matn3O35701 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Matn3O35701 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Matn3O35701 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Matn3O35701 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.11□□□□□ -0.15
Matn3O35701 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.11□□□□□ -0.15
Matn3O35701 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Matn3O35701 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.11□□□□□ -0.15
Matn3O35701 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.11□□□□□ -0.15
Matn3O35701 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.11□□□□□ -0.15
Matn3O35701 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Matn3O35701 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Matn3O35701 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Matn3O35701 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Matn3O35701 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Matn3O35701 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Matn3O35701 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Matn3O35701 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.1□□□□□ -0.15
Matn3O35701 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.1□□□□□ -0.15
Matn3O35701 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.1□□□□□ -0.15
Matn3O35701 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Matn3O35701 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Matn3O35701 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Matn3O35701 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Matn3O35701 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Matn3O35701 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Matn3O35701 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Matn3O35701 Gm6433-201ENSMUST00000118634 875 ntBASIC14.09□□□□□ -0.15
Matn3O35701 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.09□□□□□ -0.15
Matn3O35701 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Gm9987-201ENSMUST00000069768 567 ntBASIC14.09□□□□□ -0.15
Matn3O35701 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Gm5417-201ENSMUST00000079706 384 ntBASIC14.09□□□□□ -0.15
Matn3O35701 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Matn3O35701 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Matn3O35701 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms