Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.13■□□□□ 0.01
Npc1O35604 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Npc1O35604 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.13■□□□□ 0.01
Npc1O35604 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.12■□□□□ 0.01
Npc1O35604 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Npc1O35604 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Npc1O35604 Gm19164-201ENSMUST00000210667 640 ntBASIC15.12■□□□□ 0.01
Npc1O35604 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Npc1O35604 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Npc1O35604 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Npc1O35604 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.12■□□□□ 0.01
Npc1O35604 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.12■□□□□ 0.01
Npc1O35604 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Npc1O35604 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Npc1O35604 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Npc1O35604 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Npc1O35604 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Gm12350-201ENSMUST00000121208 462 ntBASIC15.11■□□□□ 0.01
Npc1O35604 Gm15173-201ENSMUST00000122049 433 ntBASIC15.11■□□□□ 0.01
Npc1O35604 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.11■□□□□ 0.01
Npc1O35604 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Npc1O35604 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Npc1O35604 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.11■□□□□ 0.01
Npc1O35604 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Npc1O35604 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Npc1O35604 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Npc1O35604 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.1■□□□□ 0.01
Npc1O35604 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Npc1O35604 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Npc1O35604 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Npc1O35604 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Gm11764-201ENSMUST00000120221 623 ntBASIC15.1■□□□□ 0.01
Npc1O35604 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.1■□□□□ 0.01
Npc1O35604 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.1■□□□□ 0.01
Npc1O35604 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.1■□□□□ 0.01
Npc1O35604 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.1■□□□□ 0.01
Npc1O35604 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Npc1O35604 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.1■□□□□ 0.01
Npc1O35604 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Npc1O35604 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Npc1O35604 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Npc1O35604 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms