Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Gm27463-201ENSMUST00000183569 57 ntBASIC12.11□□□□□ -0.47
Tnfsf11O35235 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.11□□□□□ -0.47
Tnfsf11O35235 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfsf11O35235 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tnfsf11O35235 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.1□□□□□ -0.47
Tnfsf11O35235 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gm715-201ENSMUST00000117865 831 ntBASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gm11336-201ENSMUST00000118168 334 ntBASIC12.1□□□□□ -0.47
Tnfsf11O35235 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gm3375-201ENSMUST00000203929 796 ntBASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf11O35235 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Gm12134-201ENSMUST00000122109 520 ntBASIC12.09□□□□□ -0.47
Tnfsf11O35235 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfsf11O35235 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms