Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Casp6O08738 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casp6O08738 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Casp6O08738 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casp6O08738 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Casp6O08738 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casp6O08738 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Casp6O08738 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.25□□□□□ -0.29
Casp6O08738 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Casp6O08738 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.25□□□□□ -0.29
Casp6O08738 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Casp6O08738 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.25□□□□□ -0.29
Casp6O08738 Gm5312-201ENSMUST00000203728 547 ntBASIC13.25□□□□□ -0.29
Casp6O08738 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.25□□□□□ -0.29
Casp6O08738 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.25□□□□□ -0.29
Casp6O08738 Thap2-203ENSMUST00000218989 527 ntBASIC13.25□□□□□ -0.29
Casp6O08738 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.25□□□□□ -0.29
Casp6O08738 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Casp6O08738 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casp6O08738 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Casp6O08738 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.24□□□□□ -0.29
Casp6O08738 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.24□□□□□ -0.29
Casp6O08738 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.24□□□□□ -0.29
Casp6O08738 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.24□□□□□ -0.29
Casp6O08738 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.24□□□□□ -0.29
Casp6O08738 Gm5177-201ENSMUST00000183092 997 ntBASIC13.24□□□□□ -0.29
Casp6O08738 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.24□□□□□ -0.29
Casp6O08738 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.24□□□□□ -0.29
Casp6O08738 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Casp6O08738 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.24□□□□□ -0.29
Casp6O08738 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Casp6O08738 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casp6O08738 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.23□□□□□ -0.29
Casp6O08738 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Casp6O08738 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Casp6O08738 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Casp6O08738 Gm13616-201ENSMUST00000120600 222 ntBASIC13.23□□□□□ -0.29
Casp6O08738 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.23□□□□□ -0.29
Casp6O08738 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Casp6O08738 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.23□□□□□ -0.29
Casp6O08738 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms