Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.74□□□□□ -0.21
Raet1bO08603 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.74□□□□□ -0.21
Raet1bO08603 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.74□□□□□ -0.21
Raet1bO08603 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.74□□□□□ -0.21
Raet1bO08603 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Raet1bO08603 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Raet1bO08603 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Raet1bO08603 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Raet1bO08603 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Gm9103-201ENSMUST00000119371 405 ntBASIC13.73□□□□□ -0.21
Raet1bO08603 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.73□□□□□ -0.21
Raet1bO08603 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Raet1bO08603 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.73□□□□□ -0.21
Raet1bO08603 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Raet1bO08603 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Raet1bO08603 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Raet1bO08603 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.72□□□□□ -0.21
Raet1bO08603 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Raet1bO08603 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.72□□□□□ -0.21
Raet1bO08603 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Raet1bO08603 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Raet1bO08603 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Raet1bO08603 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Raet1bO08603 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Raet1bO08603 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Raet1bO08603 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Raet1bO08603 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.71□□□□□ -0.21
Raet1bO08603 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Raet1bO08603 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Raet1bO08603 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Raet1bO08603 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.71□□□□□ -0.21
Raet1bO08603 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.71□□□□□ -0.21
Raet1bO08603 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.71□□□□□ -0.21
Raet1bO08603 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.71□□□□□ -0.21
Raet1bO08603 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Raet1bO08603 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms