Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa8J3QNX5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa8J3QNX5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Shisa8J3QNX5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Gm37722-201ENSMUST00000193757 208 ntBASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Gm10812-201ENSMUST00000099864 546 ntBASIC14.14□□□□□ -0.15
Shisa8J3QNX5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa8J3QNX5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Gm10052-201ENSMUST00000168019 960 ntBASIC14.13□□□□□ -0.15
Shisa8J3QNX5 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Gm7729-201ENSMUST00000050143 801 ntBASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa8J3QNX5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms