Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Gm9987-201ENSMUST00000069768 567 ntBASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Sybu-209ENSMUST00000228639 4113 ntBASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh1F7BJK1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdh1F7BJK1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Efs-202ENSMUST00000227037 2540 ntBASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh1F7BJK1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Gm10013-201ENSMUST00000106074 672 ntBASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh1F7BJK1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms