Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10542F6XDR3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.79□□□□□ -0.68
Gm10542F6XDR3 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10542F6XDR3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Gm13436-201ENSMUST00000120418 567 ntBASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm10542F6XDR3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm10542F6XDR3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm10542F6XDR3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm10542F6XDR3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm10542F6XDR3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm10542F6XDR3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.77□□□□□ -0.68
Gm10542F6XDR3 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10542F6XDR3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms