Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Gm26083-201ENSMUST00000157904 193 ntBASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Gm37259-201ENSMUST00000193903 849 ntBASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a3E9PWQ3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Gm29127-201ENSMUST00000188304 517 ntBASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a3E9PWQ3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm27516-201ENSMUST00000184237 98 ntBASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm37986-201ENSMUST00000193285 383 ntBASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 AA619741-201ENSMUST00000195095 646 ntBASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a3E9PWQ3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Gm2495-201ENSMUST00000191160 466 ntBASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.27■□□□□ 0.04
Col6a3E9PWQ3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a3E9PWQ3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a3E9PWQ3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a3E9PWQ3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.27■□□□□ 0.03
Col6a3E9PWQ3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.27■□□□□ 0.03
Col6a3E9PWQ3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms